Filters bio filters are used to filter the water in aquaponics systems and keep the water in your system clean. connect a bio filter to a pump, and the biological action inside the bio filter breaks down excess matter into food suitable for plants.. How to diy an aquaponic filter cheap for bigger fish. first, do not leave the standard fish tank filter in the tank! what you need: a pump. use a pump the is rated to lift the height raise between the bottom of the tank and the top of the filter. use a ½ feed line from the pump to the filter. i find ½ allows a good rate of water flow..
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